bibliography.bib

@article{delmoral:doucet:jasra:2006,
  title = {Sequential Monte Carlo samplers},
  author = {Del Moral, P. and Doucet, A. and Jasra, A.},
  journal = {Journal of the Royal Statistical Society: Series B (Statistical Methodology)},
  volume = {68},
  number = {3},
  pages = {411--436},
  year = {2006},
  url = {pmc-secure/reference_materials/DelMoralDoucetJasra2006.pdf}
}

@article{graham:meleard:1997,
  title = {Stochastic particle approximations for generalised Boltzmann models and convergence estimates},
  author = {Graham, C. and Meleard, S.},
  journal = {Annals of Probability},
  volume = {25},
  pages = {115--132},
  year = {1997},
  url = {pmc-secure/reference_materials/GrahamMeleard1997.pdf}
}

@article{graham:meleard:1999,
  title = {Probabilistic tools and Monte-Carlo approximations for some {B}oltzmann equations},
  author = {Graham, C. and Meleard, S.},
  journal = {ESAIM: Proc.},
  volume = {10},
  pages = {77--126},
  year = {1999},
  url = {pmc-secure/reference_materials/GrahamMeleard1999.pdf}
}

@article{bink:2008,
  title = {Bayesian analysis of complex traits in pedigreed plant populations},
  author = {Bink, M.C.A.M. and Boer, M.P. and ter Braak, C.J.F. and Jansen, J. and Voorrips, R.E. and van de Weg, W.E.},
  journal = {Euphytica},
  volume = {161},
  number = {1},
  pages = {85--96},
  year = {2008},
  url = {pmc-secure/reference_materials/Bink2008.pdf}
}

@article{jain:2007,
  title = {Splitting and merging components of a nonconjugate {D}irichlet process mixture model},
  author = {Jain, S. and Neal, R.},
  journal = {Bayesian Analysis},
  volume = {2},
  number = {3},
  pages = {445--472},
  year = {2007},
  url = {pmc-secure/reference_materials/Jain2007.pdf}
}

@article{griffiths:tavare:1994,
  title = {Ancestral Inference in Population Genetics},
  author = {Griffiths, R.C. and Tavare, S.},
  journal = {Statistical Science},
  volume = {9},
  pages = {307--307},
  year = {1994},
  url = {pmc-secure/reference_materials/GriffithsTavare1994.pdf}
}

@article{harding:etal:1997,
  title = {Archaic African and Asian lineages in the genetic ancestry of modern humans},
  author = {Harding, R.M. and Fullerton, M.S. and Griffiths, R.C. and Bond, J. and Cox, M.J. and  Schneider, J.A. and Moulin, D.S. and Clegg, J.B.},
  journal = {Am. J. Hum. Genet.},
  volume = {60},
  pages = {772--98},
  year = {1997},
  url = {pmc-secure/reference_materials/Hardin1997.pdf}
}

@article{stephens:donnelly:2000,
  title = {Inference in molecular population genetics},
  author = {Stephens, M. and Donnelly, P.},
  journal = {Journal of the Royal Statistical Society: Series B (Methodological)},
  volume = {62},
  number = {4},
  pages = {605--635},
  year = {2000},
  url = {pmc-secure/reference_materials/StephensDonnelly2000.pdf}
}

@incollection{griffiths:2002,
  author = {Griffiths, R.C.},
  title = {Ancestral inference from gene trees},
  booktitle = {Modern Developments in Theoretical Population Genetics: the Legacy of {G}ustave {M}al{é}cot},
  year = {2002},
  editor = {M. Veuille and M. Slatkin},
  pages = {94--117},
  publisher = {Oxford University Press},
  url = {pmc-secure/reference_materials/Griffiths2002.pdf}
}

@article{deiorio:griffiths:2004I,
  title = {Importance sampling on coalescent histories. {I}},
  author = {De Iorio, M. and Griffiths, R.C.},
  journal = {Advances in Applied Probability},
  pages = {417--433},
  year = {2004},
  url = {pmc-secure/reference_materials/DeIorioGriffiths2004I.pdf}
}

@article{deiorio:2005,
  title = {Stepwise mutation likelihood computation by sequential importance sampling in subdivided population models},
  author = {De Iorio, M. and Griffiths, R.C. and Leblois, R. and Rousset, F.},
  journal = {Theoretical Population Biology},
  volume = {68},
  number = {1},
  pages = {41--53},
  year = {2005},
  url = {pmc-secure/reference_materials/DeIorio2005.pdf}
}

@article{delmoral:patras:rubenthaler:2006,
  title = {Coalescent tree based functional representations for some {F}eynman-{K}ac particle models},
  author = {Del Moral, P. and Patras, F. and Rubenthaler, S.},
  journal = {{HAL} preprint hal-00086532},
  year = {2006},
  url = {pmc-secure/reference_materials/DelMoralPatrasRubenthaler2006.pdf}
}

@article{cornebise:moulines:olsson:2008,
  title = {Adaptive methods for sequential importance sampling with application to state space models},
  author = {Cornebise, J. and Moulines, E. and Olsson, J.},
  journal = {Statistics and Computing},
  year = {2008},
  number = {To appear},
  doi = {10.1007/s11222-008-9089-4},
  url = {pmc-secure/reference_materials/CornebiseMoulinesOlsson2008.pdf}
}

@article{douc:moulines:2008,
  title = {Limit theorems for weighted samples with applications to Sequential {M}onte {C}arlo Methods},
  author = {Douc, R. and Moulines, E.},
  journal = { Ann. Statist.},
  volume = {36},
  number = {5},
  pages = {2344--2376},
  year = {2008},
  url = {pmc-secure/reference_materials/DoucMoulines2008.pdf}
}

@article{douc:moulines:olsson:2008,
  author = {Douc, R. and Moulines, \'E. and Olsson, J.},
  title = {On the auxiliary particle filter},
  journal = {Probability and Mathematical Statistics},
  year = {2008},
  volume = {28},
  number = {To appear},
  url = {pmc-secure/reference_materials/DoucMoulinesOlsson2008.pdf}
}

@phdthesis{lefebvre:2007,
  author = {Lefebvre, G.},
  title = {Practical issues in modern {M}onte {C}arlo integration},
  year = {2007},
  school = {McGill University},
  url = {http://catalogue.mcgill.ca/F/VIEDP5VU4EPBBEYSSM3DUUVJG53UNQTJ973I5S1NPFC8DKNNGD-79641?func=full-set-set&set_number=005887&set_entry=000001&format=999},
  pdf = {pmc-secure/reference_materials/Lefebvre2007.pdf}
}