Dynamics from Structure Working Group Home Page

Announcements
October 9 meeting cancelled.

Algebra for Biology and Statistics Website

MEETING ACTIVITIES
GROUP MEMBERS
REFERENCE LIST
DATA SITES
INSTRUCTIONS FOR DIAL-IN AND WebEx ACCESS

Meeting Activities

** Clicking on a date will take you to that date on the Meeting Summary page **

DATE	TOPICS & Readings	Notes
10_09_08	Cancelled
10_02_08	Presentation by Carsten: title: Model discrimination using discrete approximations. slides
09_25_08	Presentations by Reinhard: slides and Heike: slides	References from Heike: [1] E. Remy, P. Ruet, D. Thieffry [2] A. Richard, J.-P. Comet [3] C. Soule
09_18_08	Group Introduction and organizational meeting

Group Members

(email alias for the group is alg-dyn at samsi.info)

Name	Affiliation	Email Address
Brandon Barker	Cornell University	beb82 AT cornell DOT edu
Carsten Conradi		conradi AT mpi-magdeburg DOT mpg DOT de
Alicia Dickenstein		alidick AT dm DOT uba DOT ar
Elena Dimitrova	Clemson University	edimit AT clemson DOT edu
Ian Dinwoodie	Duke University	ihd AT stat DOT duke DOT edu
Mathias Drton	University of Chicago	drton AT galton DOT uchicago DOT edu
Lee Falin		lee.falin AT gmail DOT com
Stephen Fienberg	Carnegie Mellon University	fienberg@stat.cmu.edu
Thomas Friedrich		friedrich AT math DOT fu-berlin DOT de
Gilles Gnacadja	Amgen	gnacadja AT amgen DOT com
Richard Haney	Cellular Statistics	rhaney AT cellularstatistics DOT com
Franziska Hinkelmann	Virginia Tech	fhinkel AT vt DOT edu
Serkan Hosten	San Francisco State Universitiy	serkan AT math DOT sfsu DOT edu
Abdul Salam Jarrah	Virginia Tech	ajarrah AT vbi DOT vt DOT edu
Imre Risi Kondor		risi AT gatsby DOT ucl DOT ac DOT uk
Reinhard Laubenbacher	Virginia Tech	reinhard AT vbi DOT vt DOT edu
Tong Lee		lee.ezra AT gmail DOT com
Shaowei Lin	Univ. of California-Berkeley	shaowei AT math DOT berkeley DOT edu
Hugo Maruri-Aguilar	London School of Economics	H.Maruri-Aguilar AT lse DOT ac DOT uk
Edwin O'Shea		edwin AT math DOT cinvestav DOT mx
Megan Owen	SAMSI	maowen AT samsi AT info
Mercedes Soledad Perez Millan		mercedes.s.pm AT gmail DOT com
Dustin Reishus	University of Southern California	reishus AT usc DOT edu
Anne Shiu	Univ. of California-Berkeley	annejls AT math DOT berkeley DOT edu
Heike Siebert		siebert AT mi DOT fu-berlin DOT de
Brandy Stigler	Southern Methodist University	bstigler AT smu DOT edu
Seth Sullivant	NCSU	seths AT math DOT harvard DOT edu
Brett Tyler	Virginia Tech	bmtyler AT vt DOT edu
Jung-Ying Tzeng	N.C. State University	jytzeng AT stat DOT ncsu DOT edu
Carolina Uhler	Univ. of California-Berkeley	cuhler AT stat DOT berkeley DOT edu
Alan Veliz-Cuba	Virginia Tech	alanavc AT vt DOT edu
Benjamin Wells	N.C. State University	btwells AT ncsu DOT edu
Henry Wynn	London School of Economics	H.Wynn AT lse DOT ac DOT uk
Richard Yamada	University of Michigan	yryamada AT umich DOT edu
Shantia Yarahmadian	Indiana University	syarahma AT indiana DOT edu
Saeid Yasamin		syasamin AT gmail DOT com
Yi Ming Zou	University of Wisconsin-Milwaukee	ymzou AT uwm DOT edu
Or Zuk	M.I.T.	orzuk AT broad DOT mit DOT edu

Reference List

(bibliographic format)

1. E. Remy, P. Ruet, D. Thieffry, (2008), Graphic requirements for multistability and attractive cycles in a Boolean dynamical framework
2. A. Richard, J.-P. Comet, (2007), Necessary conditions for multistationarity in discrete dynamical systems
3. C. Soule, (2006) Mathematical approaches to differentiation and gene regulation

Data Sites

Working Groups Dial-in & WebEx Instructions

1. Go to the email invitation that you received announcing the meeting, or go directly to WebEx: https://samsi.webex.com
2. Click on the link for the meeting you want to join
      • Enter Your Name, Your Email Address and the meeting password from the email invitation
      • The first time you use WebEx, the Meeting Manager will run and it will take about a minute to setup.
    • Now you are in the meeting and can use all the features of WebEx
3. Dial the teleconference line: 919-685-9338.
      • It is necessary to separately call into the given conference-line phone number to obtain audio interaction; we are not able to use WebEx for an audio connection. When calling in:
          o do not use a computer microphone or a speaker phone; this causes severe feedback in the system;
          o headphones and hand-held phones are fine.
      • If cost of telephone calls is an issue, consider using either Skype or JaJah to place your calls to the conference line; these are virtually free within North America, and (for example) only cost roughly 2 cents and 3 cents per minute, respectively, from Europe.
      • Please dial no earlier than 5 minutes prior to the start of the working group meeting.

Please Note: You should be seeing the screen of the presenters. If not, please send a message or call for assistance. WebEx can run slowly on Unix machines.

If you are having trouble with WebEx or the Teleconference line please contact Sue McDonald, sue@samsi.info (919)685-9359 or James Thomas, help@samsi.info (919)685-9307

You can learn more about WebEx and take tutorials at university.webex.com.